Plant models across scales (I)
Organizers: Mariya Ptashnyk & Eva E. Deinum​ /
10:40 – 11:00 – From cell to tissue: Multiscale modelling and analysis of growth / Presenting author: Annamaria Kiss.
11:00 – 11:20 – Mobility of charged molecules through plasmodesmata / Presenting author: Kaare H. Jensen.
11:20 – 11:40 – Organization of plant cortical microtubules on curved surfaces / Presenting author: Tim Tian
11:40 – 12:00 – Efficient algorithm for realistic microtubule-based nucleation in the cortical microtubule array/ Presenting author: Marco Saltini
Modelling tissue mechanics and cell fate in regeneration and cancer (I)
Organizers: Gabriel Piedrafita & Qiyao (Alice) Peng & José Manuel​ GarcÃa Aznar /
10:40 – 11:00 – Modelling a proliferative disorder of the bone: Fibrous Dysplasia / Presenting author: Magdalena Caballero.
11:00 – 11:20 – Efficient cell-based modelling in Julia with applications to development and cancer / Presenting author: Gabriel Torregrosa Cortés.
11:20 – 11:40 – Hybrid cellular potts modelling of angiogenesis: Cell-extracellular matrix interactions and cell-fate decisions / Presenting author: Roeland Merks.
11:40 – 12:00 – A simple predictive cell-fate model of epithelial clone dynamics/ Presenting author: Gabriel Piedrafita.
Mechanistic learning in mathematical oncology (I)
Organizers: Alvaro Köhn-Luque & Saskia Haupt.
10:40 – 11:00 – A review of mechanistic learning in mathematical oncology. / Presenting author: Saskia Haupt.
11:00 – 11:20 – Integrating machine learning and mechanistic modeling enables non-invasive measurement of intra-tumoral fluid transport in dynamic MRI. / Presenting author: Russell Rockne.
11:20 – 11:40 – How to make clinical predictions when we do not know everything. / Presenting author: Haralampos Hatzikirou.
11:40 – 12:00 – Predicting anatomical tumor growth in pediatric glioma by guided denoising diffusion models. / Presenting author: Sarah Brüningk
Travelling wave phenomena in biology (I)
Organizers: Lukas Eigentler & Mattia Sensi​
10:40 – 11:00 – How different forms of leadership impact on collective migration / Presenting author: Sara Bernardi.
11:00 – 11:20 – Self-organised patterning in chemotaxis of multicellular communities / Presenting author: Giulia Laura Celora
11:20 – 11:40 – Rethinking tipping points in spatial ecosystems / Presenting author: Swarnendu Banerjee.
11:40 – 12:00 – The role of front instabilities in reversing species invasion and desertification / Presenting author: Michel Ferre Diaz.
Deciphering intracellular reaction processes: Bridging Stochastic models with single-cell measurement technologies (I)
Organizers: Elena Sofia & D’Ambrosio​
10:40 – 11:00 – From single cells to microbial consortia and back: Stochastic chemical kinetics coupled to population dynamics / Presenting author: Jakob Ruess.
11:00 – 11:20 – Hawkes process modelling for chemical reaction networks in a random environment / Presenting author: Mark Sinzger D’Angelo
11:20 – 11:40 – A scaling analysis of stochastic models of regulation of protein production in bacterial cells / Presenting author: Philippe Robert
11:40 – 12:00 – Unbiased estimation of second-order parameter sensitivities for stochastic reaction networks / Presenting author: Quentin Badolle
Mathematical models for vector-borne infections (I)
Organizers: Christopher Kribs​ & Andrea Pugliese​
10:40 – 11:00 – The impact of infestation behaviors on vector-borne disease: cofeeding transmission dynamics / Presenting author: Jianhong Wu.
11:00 – 11:20 – Spatio-temporal dynamics of arbovirus transmission and control / Presenting author: Ilaria Dorigatti.
11:20 – 11:40 – Modeling the risk of arboviral transmission at detailed spatio-temporal
scales / Presenting author: Piero Poletti
11:40 – 12:00 – Estimating the risk of vector-borne disease spread in seasonal
environments / Presenting author: Kyeongah Nah
Collective behaviour across scales: drawing parallels from cells to humans
Organizers: Andrei Sontag & Kit Yates​
10:40 – 11:00 – Self-organitation in multicellular syste from collective motion to stem cell pattering / Presenting author: David Brückner.
11:00 – 11:20 – Mechanims underlying synchronization during collective hunting in social spiders / Presenting author: Violette Chiara.
11:20 – 11:40 – Collective decision making in locust groups / Presenting author: Kit Yates.
11:40 – 12:00 – Pathways for overturning consensus in human collective decision-making / Presenting author: Andrei Sontag.
Thermodynamics of living systems
Organizers: Maarten Droste & Robert Planqué​ /
10:40 – 11:00 – Opening the black box: Thermodynamics of microbial growth / Presenting author: Oliver Ebenhöh.
11:00 – 11:20 – Combining thermodynamic, kinetic and physiological tools to unravel basic and applied problems in microbiology / Presenting author: Karel Olavarria.
11:20 – 11:40 – Network-wide thermodynamic contraints shape NAD(P)H cofactor specificity of metabolic reactions / Presenting author: Steffen Klamt.
11:40 – 12:00 – Thermodynamic modeling for metabolic pathways / Presenting author: Elad Noor.
Emerging data driven approaches for increasing the prediction and understanding of biological processes
Organizers: Joanne Dunster & Sara Jabbari​
10:40 – 11:00 – Feature selection and parameter inference with sparsley sampled data via lasso and global optimization / Presenting author: Rahma Abdulahi.
11:00 – 11:20 – Building interpretable machine learning models from omics data to better understand biology / Presenting author: Rachel Cavill.
11:20 – 11:40 – Mechanical regulation and cell cycle dynamics in models of collective cell migration / Presenting author: Carles Falcó.
11:40 – 12:00 – Reducing uncertaintly in ion channel models via experimental design and accounting for experimental artefacts / Presenting author: Gary Mirams.
New directions for stochastic models on epidemics (II)
Organizers: Jacob Curran-Sebastian & Thomas House
15:00 – 15:20 – Time series models of epidemics and associated tree structures / Presenting author: Niket Thakkar.
15:20 – 15:40 – Long-term behaviour of a stochastic epidemic in a growing population / Presenting author: Malwina Luczak.
15:40 – 16:00 – Modeling the impact of human movement on the spread of Dengue Virus: the importance of appropiate spatial scales / Presenting author: Alun Lloyd.
16:00 – 16:20 – Modeling spreading on networks / Presenting author: James Gleeson.
