Plant models across scales (II)
Organizers: Mariya Ptashnyk & Eva E. Deinum
17:00 – 17:20 – Using 3D finite element method simulations to unravel the interplay between plant stomata morphology and function / Presenting author: Melissa Tomkins
17:20 – 17:40 – Plant morphogenesis across scales / Presenting author: Arezki Boudaoud.
17:40 – 18:00 – Root water uptake modelling across scales / Presenting author: Andrea Schnepf
18:00 – 18:20 – Modelling the influence of root rhizodeposits on soil hydraulics and root water uptakes / Presenting author: Andrew Mair
Bacteria
15:00 – 15:20 – Model-based experimental design to identify microbe interactions / Presenting author: Geoffrey Roudaut
15:20 – 15:40 – Modelling tripartite microbial population dynamics / Presenting author: Tanvir Hassan
15:40 – 16:00 – Coupling cell size regulation and proliferation dynamics of microbes reveals cell division based on surface area / Presenting author: Abhyudai Singh.
16:00 – 16:20 – Anticipating pathogen dynamics using Bayesian model-averaging with partial differential equations / Presenting author: Candy Abboud Edwards
Plant models across scales (I)
Organizers: Mariya Ptashnyk & Eva E. Deinum /
10:40 – 11:00 – From cell to tissue: Multiscale modelling and analysis of growth / Presenting author: Annamaria Kiss.
11:00 – 11:20 – Mobility of charged molecules through plasmodesmata / Presenting author: Kaare H. Jensen.
11:20 – 11:40 – Organization of plant cortical microtubules on curved surfaces / Presenting author: Tim Tian
11:40 – 12:00 – Efficient algorithm for realistic microtubule-based nucleation in the cortical microtubule array/ Presenting author: Marco Saltini
Vaccine strategies (II) and Extracellular matrix (II)
17:20 – 17:40 – Cells align to structured collagen fibrils in a hybrid cellular Potts model / Presenting author: Koen Keijzer.
17:40 – 18:00 – Phase field model for cell spreading dynamics / Presenting author: Mohammad Abu Hamed. — Cancelled
18:00 – 18:20 – Dynamic ECM remodeling during formation of tumor-associated collagen signatures / Presenting author: Katarzyna Rejniak.
Plants
17:20 – 17:40 – Coupling plant physiology and pest demography to understand plant-nematode interactionsl / Presenting author: Joseph Penlap.
17:40 – 18:00 – A mathematical model of photoinhibition: exploring the impact of quenching processes / Presenting author: Tim Nies.
18:00 – 18:20 – Levet set method for plants with growing lesions / Presenting author: Sheila Rae Permanes.
Virus Modelling
17:20 – 17:40 – Viral kinetics for early infection of SARS-CoV-2 and risk analysis / Presenting author: Jingsi Xu.
17:40 – 18:00 – Accurate and efficient integration of within-host models into discrete stochastic population models of infectious diseases / Presenting author: Mark B Flegg.
18:00 – 18:20 – Efficient coupling of within-and between-host infectious disease dynamics / Presenting author: Cameron Smith.
Blood flow
15:00 – 15:20 – Notch Flow-driven polarisation and signalling in vessels – A mathematical model / Presenting author: Rui Travasso.
15:20 – 15:40 – Modeling of the oxygen and carbon dioxide transport through the lung to the blood / Presenting author: Frédérique Noël.
15:40 – 16:00 – Systems biology approaches to studying subcellular mechanisms and their regulation in the human platelet / Presenting author: Joanne Dunster.
16:00 – 16:20 – Exact solutions and conservation laws of a one-dimensional PDE model for a blood vessel / Presenting author: Almudena P. Márquez.
Dynamical systems in biomedicine
15:00 – 15:20 – Analysing the entrainment dynamics of models of the central circadian clock / Presenting author: Franz Aschl.
15:20 – 15:40 – Spike-adding phenomena in bursting models: Dissecting the bifurcation skeleton / Presenting author: Lucía Pérez.
15:40 – 16:00 – Approximation of reproduction numbers of age-structured models / Presenting author: Francesca Scarabel.
16:00 – 16:20 – A differential geometric analysis of perpetual and equilibrium points multistable dynamical systems / Presenting author: Sam Subbey.
Arthropod biology
15:00 – 15:20 – Sensing electrical environments: the unique sense of electroreception / Presenting author: Ryan Palmer.
15:20 – 15:40 – Population dynamics of tick in Korea and the potential impact of climate change and control measures / Presenting author: Heejin Choi.
15:40 – 16:00 – Towards a generic tick life cycle model / Presenting author: Slimane Ben Miled.
16:00 – 16:20 – Pest detection from a biology-informed inverse problem and pheromone sensors / Presenting author: Thibault Malou.
Extracellular Matrix (I)
10:40 – 11:00 – Modelling and simulation of intracellular signaling pathways: coupling chemical processes and mechanical properties / Presenting author: Sofie Verhees.
11:00 – 11:20 -Mathematical modelling of wild type and mutant / Presenting author: Marcos Gouveia.
11:20 – 11:40 – Modelling the regulation of chronic wounds by tissue inhibitors of matrix metalloproteinases / Presenting author: Sonia Dari.
11:40 – 12:00 – Microenvironment anisotropy drives cell migration and large-scale nuclear deformations – a coupled in silico and in vitro study / Presenting author: Ana Bensabat.
