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Genetic and non-genetic routes to phenotypic plasticity in cancer

Organizers: Carmen Ortega – Sabater & Mohit K. Jolly

10:40 – 11:00 – Low dimensionality of phenotypic space as an emergent property of network topology / Presenting author: Pradyumna Vinod Harlapur.

11:00 – 11:20 – 4 states are not equal to 4 dimensions: Proneural-Mesenchymal antagonism dominates the patterns of phenotypic heterogeneity in glioblastoma. / Presenting author: Harshavardhan BV

11:20 – 11:40 – Chromosomal instability as a source of phenotypic variation in childhood B-Acute Lymphoblastic leukemia / Presenting author: Carmen Ortega-Sabater

11:40 – 12:00 – A mathematical model in evolutionary medicine: coordinated inheritance of extrachromosomal DNA types / Presenting author: Elisa Scanu.

Human diseases (II)

17:20 – 17:40 – Modelling immune cell-endometrial cell dynamics in endometriosis / Presenting author: Claire Miller.

17:40 – 18:00 – Stratifying and predicting the progression of acute liver failure during the early phases / Presenting author: Raiki Yoshimura.

18:00 – 18:20 – Mathematical modelling of thyroid hormone dynamics in hypo- and hyperthyroidism / Presenting author: Tony Humphries.

Ecology

15:00 – 15:20 – Assessing the coupled effects of fishing pressure and climate change on West Greenland’s ecosystem using an end-to-end ecosystem model / Presenting author: Matthew Hatton.

15:20 – 15:40 – Critical gap size / Presenting author: Ali Beykzadeh.

15:40 – 16:00 – Speed and shape of population fronts with density dependent diffusion / Presenting author: Beth Stokes.

16:00 – 16:20 – Impact of biodiversity loss on the structure and stability of a marine Antarctic food web / Presenting author: Vanesa Salinas.

Modelling and analysis in cell biology: multi-scale perspectives

Organizers: Martina Conte & Romina Travaglini
10:40 – 11:00 – Modeling non-local cell-cell adhesion: a multi-scale approach / Presenting author: Anna Zhigun.

11:00 – 11:20 – Diffudion-driven instability in bulk-surface reaction-diffusion systems / Presenting author: Davide Cusseddu.

11:20 – 11:40 – A linear optimal control model of immunotherapy for recurrent autoimmune disease / Presenting author: Kamila Azib.

11:40 – 12:00 – A computational multi-scale approach to the therapeutic resistance of protaste cancer / Presenting author: Marianna Cerasuolo.

Human diseases (I)

17:20 – 17:40 – Amplitude and frequency variation in stimulated glycemic rhythms / Presenting author: Benoit Huard.

17:40 – 18:00 – Modeling a rare disease: a case in fibrous dysplasia / Presenting author: Juan Carlos BeltrΓ‘n Vargas.

18:00 – 18:20 – Mathematical modeling of phosphate kinetics for hemodialysis / Presenting author: Morten Andersen.

Mathematical modeling of microbial ecological systems: Bridging theory and experiments (II)

Organizers: Havva YoldaΕŸβ€‹ & Rebeca Gonzalez – Cabaleiro​.

15:00 – 15:20 -Impact of an obligate predator on microbial ecosyste The challenges and benefits of combining modelling and high throughput chemostat arrays / Presenting author: J. Kimberley Summers

15:20 – 15:40 – Harnesing synthetic microbial communities for environmental bioremediation: Insights from genome-scale metabolic modeling / Presenting author: William Scott.

15:40 – 16:00 – Dynamics of encapsulated bacteriophage in the gastrointestinal tract / Presenting author: Carles Barril

16:00 – 16:20 – Closing talk on ‘Mathematical modeling of microbial ecological syste Bridging theory and experiments’ / Presenting author: Havva Yoldas

Mathematical modeling of microbial ecological systems: Bridging theory and experiments (I)

Organizers: Havva Yoldaş & Rebeca GonzÑlez Cabaleiro.

10:40 – 11:00 – Heterogeneous structuring in travelling wave solutions of a trait-structure Keller-Segel model / Presenting author: Viktoria Freingruber

11:00 – 11:20 – Analysis of a fractional cross-diffusion system for multi-species populations / Presenting author: Nicola Zamponi

11:20 – 11:40 – Unravelling the debate on the oxygen requirements of comammox Nitrospira through theory-based modelling / Presenting author: Eloi Martinez-Rabert

11:40 – 12:00 – Bioenergetic metabolic models for understanding and designing open mixture culture fermentation process / Presenting author: Alberte Regueira

Applied multi-scale modelling methods in dynamic tissue remodelling

Organizers: Arran B. J. Hodkingson & Anna Zhigun​

15:00 – 15:20 – Towards modelling meniscus tissue regeneration – an interdisciplinary approach / Presenting author: Christina Surulescu.

15:20 – 15:40 – Multiscale modelling and analysis for Glioblastoma Multiforme progression and relapse / Presenting author: Dumitru Trucu.

15:40 – 16:00 – Mathematical modelling of cancer invasion: Phenotypic transitioning provides insight into multifocal foci formation / Presenting author: Zuzanna Szymanska.

16:00 – 16:20 – Hybrid modelling of spatially extended reaction-diffusion processes / Presenting author: Kit Yates.

Complexity science for biological and medical problems

Organizers: JesΓΊs J. Bosque​

10:40 – 11:00 – Data-driven approaches to study the complexity of organelles / Presenting author: Konstantinos Giannakis.

11:00 – 11:20 – Using neuronal cultures as a model system for medicine: From complex networks to therapy / Presenting author: Jordi Soriano.

11:20 – 11:40 – IMathematical essence of aging / Presenting author: Uri Alon.

11:40 – 12:00 – Bridging networks for drug repurposing: Insightd from network medicine / Presenting author: LucΓ­a Prieto SantamarΓ­a.

Cell biology

15:00 – 15:20 – Investigating spatial signatures of extrachromosomal DNA in cancer with agent-based modelling / Presenting author: Magnus Haughey

15:20 – 15:40 -Integrated understanding of human PGCLC development using multi-scale mathematical modeling of gene-cel-BMP dynamics/ Presenting author: Michito Ujino

15:40 – 16:00 – Mathematical modeling of subunit formation in Pex14 / Presenting author: Mio Heinrich

16:00 – 16:20 – Identifying the number of rate-limiting steps in transcription initiation, mRNA splicing and nuclear export from mRNA count data / Presenting author: Andrew Nicoll